Name: Simulating a Million Patients: Realistic Health Data Generation in Rust
Start: 2026-09-10T11:00:00-0400
End: 2026-09-10T11:40:00-0400

Simulating a Million Patients: Realistic Health Data Generation in Rust

Thursday September 10, 2026 11:00 - 11:40 EDT

Palais des Congrès de Montréal

Healthcare researchers desperately need realistic synthetic patient data: for teaching, for testing analysis pipelines, and for sharing results without compromising real patients' privacy. But generating data that's actually realistic is surprisingly hard. Naïve approaches produce patients who are statistically implausible: twenty-year-olds with dementia, smokers whose blood pressure is unaffected by their habit, populations where diabetes and hypertension never co-occur.

This talk presents a graph-based approach to synthetic patient generation, built in Rust, that models how diseases actually progress through a human life. Using directed acyclic graphs with age-banded transition probabilities, the system walks each simulated patient through decades of accumulating risk factors, diagnoses, and complications, producing population-level data that preserves the statistical relationships epidemiologists rely on.

We'll trace a concrete clinical scenario, elderly patients developing diabetes, then hypertension, then suffering a transient ischaemic attack, from its representation as a DAG, through its implementation in Rust, to its output as a million-row dataset. Along the way, we'll cover the Rust design decisions that made this tractable: strong types that prevent impossible patient states, seeded RNG for scientific reproducibility, and the adaptor pattern that lets the same patient model emit records in different clinical formats.

You don't need a medical background to follow this talk. You'll leave with transferable patterns for modelling complex real-world processes as graphs, and a new appreciation for why Rust's type system is a gift to scientific computing.

Speakers

Dr. Caroline Morton

Senior Software Consultant / Epidemiologist, Parakeet Consulting

Dr. Caroline Morton is a medical doctor, epidemiologist, and senior rust software engineer working at the intersection of public health and modern software. She is the founder of two companies, the author of over 70 academic papers and two books, and the creator of open-source tools... Read More →

Thursday September 10, 2026 11:00 - 11:40 EDT
Palais des Congrès de Montréal

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